Is the Dana 44 geared at 3.73 any stranger then the 35 geared at 4.88? Never used an axle with locker, so dont think I will miss it. Though the LJ has rear disk brake, is that really worth it?
For drivability, you'll want at least 4.88 gears with the 35" tires, 3.73s are not going to cut it. If your going to stay with the 35" tires you should consider to either change over your Dana 35 to a Super 35 or regear the Dana 44 to match the 4.88s you already have up front. I think you'd be better off having a more stout axle out back.