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You didn't jump a tooth, those lines will match up if they are rotated. A jumped tooth looks very different. You have one mark left of center and one right of center. If you jump a tooth both will be left or right of center. If you play with your old timing chain you'll see what I mean.
For reference...after a LOT of searching...the cam bolt pin is .248 inches in diameter and .834 long. It should extend about an 1/8" beyond the cam.
Definitely replace the pulley. And, if you go into the oil pan, consider replacing the oil pump. Melling makes two versions, a standard and a high volume. Just use the standard pump.