Then I agree with you. Even if it is stiff, that is not your heat problem.
You said earlier, "The blend door actuator fully goes in either direction as compared to my buddies 03. And if I manually turn it I can hear the flapper, could it still be that door?"
When you say manually turn it, are you removing the actuator and turning it by hand?
With the jeep running, the blower on, do you feel any temperature difference from the vents when you manually turn the flapper? If not, then the flapper isn't working correctly.
If you aren't familiar with how it works, this video is a pretty good summary of what is supposed to be going on.
What's inside a heater core box? (Around 5:30 is where he talks about the heater core.)